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[Schrodinger] schrodinger small-molecule drug discovery suite introduction

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发表于 2012-12-18 17:54:46 | 显示全部楼层 |阅读模式

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Included Programs:
  • Canvas
  • CombiGlide
  • ConfGen
  • Core Hopping
  • Desmond
  • Epik
  • Field-Based QSAR
  • Glide
  • Induced Fit
  • Jaguar
  • KNIME Extensions
  • Liaison
  • LigPrep
  • MacroModel
  • Maestro
  • Maestro Elements
  • Phase
  • Phase Shape
  • Prime
  • PrimeX
  • Protein Preparation Wizard
  • QM-Polarized Ligand Docking
  • QSite
  • QikProp
  • SiteMap

Wide range of virtual screening options, spanning the spectrum
of speed vs. accuracy tradeoffs • 2D/3D QSAR with a large selection of fingerprint options • Shape-based screening, with or without atom properties • Ligand-based pharmacophore modeling • e-Pharmacophore modeling incorporating ligand-receptor interaction energies • Flexible ligand docking with industry-leading Glide • SIFt — structure interaction fingerprint analysis • Induced-fit docking with receptor flexibility • Covalent docking • 2D ligand interaction diagrams Advanced computations to estimate binding affinity and to rank-order compounds • Embrace post-docking refinement • Prime MM/GBSA • Free energy perturbation (FEP) theory • Linear interaction approximation (LIA) • QM-polarized ligand docking Analyses to predict, prepare, refine, and characterize target structure
and binding modes • Protein crystal structure refinement • Protein structure analysis and homology modeling • GPCR and hERG modeling • Protein binding site identification and analysis • Multiple binding mode prediction Complete set of utilities to prepare, analyze, and filter ligand structures and to
create and design ligand libraries • 2D to 3D structure conversion, with emphasis on bioactive conformers • Tautomeric state enumeration and analysis • Ligand interaction diagram • Commercially-available compound database • Flexible ligand superposition • Combinatorial library creation • Core hopping • Filter compound libraries based on predicted ADME properties • R-group analysis General modeling tools that can be applied across a wide range of chemical systems • High-performance QM calculations, in gas phase and in solution • MM/MD simulations, with implicit or explicit solvents • Small molecule and macromolecular conformational analyses • Mixed-mode QM/MM calculations for ground state and reactivity studies Fully supported by state-of-the-art visualization and workflow automation tools • Unified graphical user interface, Maestro, that serves all computations • Publication-quality graphics and flexible analysis • KNIME Extensions and customizable workflows • Python API   

本帖被以下淘专辑推荐:

发表于 2015-6-16 18:15:45 | 显示全部楼层
ts2009 发表于 2012-12-18 19:03
买了下  直接花掉一半身价。。。

敢问一下 你身价多少?
发表于 2012-12-18 18:01:16 | 显示全部楼层
金币不够
发表于 2012-12-18 18:11:36 | 显示全部楼层
虽然在用,不过想感受下win32,可惜,穷人啊...
发表于 2012-12-18 19:03:49 | 显示全部楼层
买了下  直接花掉一半身价。。。
发表于 2012-12-18 19:27:23 | 显示全部楼层
发表于 2012-12-19 06:26:56 | 显示全部楼层
穷人啊!看看而已
发表于 2012-12-19 09:08:18 | 显示全部楼层
手里有2009版,有钱再更新一下!
发表于 2012-12-19 11:21:47 | 显示全部楼层
ts2009 发表于 2012-12-18 19:03
买了下  直接花掉一半身价。。。

h哈哈,多来论坛赚回来。
金币还是很好赚的,哈哈~
发表于 2012-12-19 13:32:20 | 显示全部楼层
大工-阿里巴巴 发表于 2012-12-18 19:27
苏州大学的对吧~我们很久之前在小木虫上对过话的~哈哈,zh1987hs

呵呵  是的  有段时间 我就是不怎么喜欢改ID啊 以后多多交流
发表于 2012-12-19 13:33:22 | 显示全部楼层
dejunchem 发表于 2012-12-19 11:21
h哈哈,多来论坛赚回来。
金币还是很好赚的,哈哈~

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